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RE: Lab Diaries #5 - Gene Set Enrichment Analysis (GSEA) of a Large-Scale Biological Data, Part I

in #steemstem • 6 years ago

Oh wow, this is prompting me to get my butt off Steemit during lunch and do some sideline research. It seems like gene sets have a pretty clear analog in 'functional guilds' in microbio. I wonder if anyone has translated the mathematics over into ecology.

6 years ago in #steemstem by
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     6 years ago 

    In ecology - they need us :D

    The most popular is an easy matrix algebra, "game of life" simulation
    Or they measure various parameters and need some multivariate analysis to obtain the conclusion

    And the latest fashion and the closest thing to your question is: environmental DNA (eDNA)

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     6 years ago 

    I hear what you're saying, but ecological modelling has progressed far beyond Conway's game of life.

    • LTI systems modelling migration behavior
    • various ODE and PDE models of population dyanmics
    • ecological network inference and modelling (including keystone species prediction and syntrophic pair identification)

    etc

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     6 years ago 

    You are in the field... :)

    And you just went to my auto-voter

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     6 years ago 

    Aww, thanks.

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