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RE: Particle in a Double well potential: A molecular dynamics toy example using openMM toolkit
Oh of course! I have to look closer next time. Reminds me of my biophysics courses at the University used to.
So this equation would explain why the yellow dot moves as it moves in a crowd of smaller particles?
No. If the yellow particle was allowed to move freely, Potential surface would be like a flat plane surface. But now if I compel my particle under this curvy potential with two minimas, that is what I am defining by this equation. Great question btw. I should have been more clear in the article. But I hope people read comment section too. :)
By the way, just defining this potential function won't make things alive. That's what the langevin equation is there. That equation gives life to the particle under whatever potential you define.
Very cool reply!
The langevin equation makes things become alive
That's mathematics at it's best.
Thanks again
Best
Chapper
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